On Tue, 4 Aug 2015 17:26:00 +0000
"Kandalaft, Iyad" <Iyad.Kandalaft@AGR.GC.CA> wrote:

> As a supplement to Oksana's original inquiry, we, at AAFC, couple
> Galaxy to SGE  and possibly a different grid engine in the future for
> job scheduling.  The old-fashioned way of doing that is to unify
> storage path and UID/GID between the application server and cluster.


I am starting to warm of the idea of making a small web interface that
asks for a few configuration options:
1. type of grid engine
2. desired docker/galaxy flavour (RNA, exome, WGS, ...)
3. ... (e.g. intial admin user and password)

and would pull Björn's relevant Dockerfile, patch it and generate a new
one, tailored to the need of the user.

I think it is impossible to have a set of dockerfiles for all the
desired configurations (think analysis flavours times number of cluster
types - for example).

I will need to implement something like this very soon, and I would not
mind to do it in a way that the community could reuse...

So comments would be appreciated...

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