On Wed, Feb 1, 2012 at 5:44 PM, Nate Coraor <nate@bx.psu.edu> wrote:
On Feb 1, 2012, at 12:16 PM, Peter Cock wrote:
We've changed some things on the cluster to prepare for this - e.g. our Galaxy server is now a proper SGE submit host, so I'm not quite ready to move the production server... still a few little things to sort out first, e.g. https://bitbucket.org/galaxy/galaxy-central/issue/713
I suspect that you are going to encounter more problems with the local and cluster mountpoints being different. Is it not possible to mount it at /data/galaxy on the Galaxy server?
It is mounted at /data/galaxy on the Galaxy server, but at /mnt/galaxy on the cluster, but I see what you mean. The two machines are administered by different people, but we can probably find a common mount point if trying to do this with symlinks is really not recommended. Thanks, Peter