5 Jan
2012
5 Jan
'12
12:56 p.m.
On Jan 5, 2012, at 1:10 PM, Ryan Golhar wrote:
I discovered the problem. My pbs queue has a wall time restriction of 3600 seconds.
Is there a way to configure Galaxy to keep the job files for only failed jobs? I'd like to keep these two settings on, but find it unnecessary if jobs successfully complete.
The other option I would ask is to include the output of failed jobs in the runner log...
This could be extremely large, depending on the output, and might make it difficult to parse logs. Hopefully the cleanup_job = onsuccess as provided by Dannon would be a suitable replacement, however. --nate