Hey guys, I successfully fixed my problem. Here's the solution if you would like to know: 1. download zlib-1.2.8.tar.gz 2. ./configure --prefix=/usr/local/zlib-1.2.8 3. make 4. make install 5. add the following in the file config/local_env.sh export LD_LIBRARY_PATH=/usr/local/zlib-1.2.8${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}} Edgar Fernandez System Administrator (Linux) Direction Générale des Technologies de l'Information et de la Communication Université de Montréal PAVILLON ROGER-GAUDRY, bureau X-210 I Bur. : 1-514-343-6111 poste 16568 -----Original Message----- From: Peter Cock [mailto:p.j.a.cock@googlemail.com] Sent: May-26-16 3:32 AM To: Fernandez Edgar <edgar.fernandez@umontreal.ca>; Nate Coraor <nate@bx.psu.edu> Cc: galaxy-dev@bx.psu.edu Subject: Re: [galaxy-dev] not sure what I can do about this... Sorry Edgar, It looks like something else is causing this error (and my guess about different versions of Linux on Galaxy and the cluster was wrong): ImportError: /home/galaxy/galaxy-v16.01/.venv/lib/python2.7/site-packages/pysam/libchtslib.so: undefined symbol: gzopen64 It may be important how the pysam wheel was compiled, perhaps Nate may be able to comment (CC'd). Peter On Wed, May 25, 2016 at 12:40 PM, Fernandez Edgar <edgar.fernandez@umontreal.ca> wrote:
Hello Peter,
For now, my new installation of galaxy v16.01 is on one test desktop running Oracle Linux 6. Before changing my production installation, I'm doing my due diligent.
Let me know what you think...
Edgar Fernandez