Peter Cock wrote:
On Mon, May 16, 2011 at 8:59 PM, Spunde, Alex <aspunde@illumina.com> wrote:
Same thing:
[aspunde@ilmnhw-biolin10 galaxy-dist]$ python ./scripts/fetch_eggs.py Fetched http://eggs.g2.bx.psu.edu/Babel/Babel-0.9.4-py2.6.egg Fetched http://eggs.g2.bx.psu.edu/docutils/docutils-0.7-py2.6.egg Fetched http://eggs.g2.bx.psu.edu/pysqlite/pysqlite-2.5.6_3.6.17_static-py2.6-linux-... Fetched http://eggs.g2.bx.psu.edu/GeneTrack/GeneTrack-2.0.0_beta_1_dev_48da9e998f0ca... One or more of the python eggs necessary to run Galaxy couldn't be downloaded automatically. You can try building them by hand (all at once) with: python scripts/scramble.py Or individually: python scripts/scramble.py Babel python scripts/scramble.py docutils python scripts/scramble.py GeneTrack
I had a similar issue which was down to the file permissions - sudo fixed it, and I redid the chown afterwards.
Alex and I had a bit of off-list communication on this one and I forgot to post the eventual solution back to the list. There is a bug here, I haven't yet tracked down the cause, but I found that it can be worked around by repeatedly running scripts/fetch_eggs.py until all eggs are fetched and the script returns with no output. --nate
Peter
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