(Sachit, please don't cross-post to the dev and user lists?)

There's a beta version of an edgeR/deseq/voom wrapper and a companion htseq based count matrix maker in the test toolshed statistics section owned by me - fubar. Definitely not quite ready for production but installable and I'd appreciate feedback from anyone brave enough to try them out. Best installed on a test instance you plan on destroying because the R 3.0 dependency is about to swap over to Bjorns better one - should be done later this week when I get some time. 

Be warned it takes a long time to auto-install - 10-15 minutes or so on my laptop.

On Mon, Jul 8, 2013 at 3:36 PM, Sachit Adhikari <sachit.technerves@gmail.com> wrote:

Hi,

These are the R libraries. Have anyone written a wrapper for these libraries "lumi", "DESeq" "edgeR"? 

Thanks,

Sachit

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

--
Ross Lazarus MBBS MPH;
Head, Medical Bioinformatics, BakerIDI; Tel: +61 385321444
http://scholar.google.com/citations?hl=en&user=UCUuEM4AAAAJ