Tool: Assemble with MIRA v3.4 | |
---|---|
Name: | MIRA log |
Created: | Fri Aug 22 00:24:38 2014 (UTC) |
Filesize: | 0 bytes |
Dbkey: | ? |
Format: | txt |
Galaxy Tool Version: | 0.0.10 |
Tool Version: | None |
Tool Standard Output: | stdout |
Tool Standard Error: | stderr |
Tool Exit Code: | None |
API ID: | d5f55b83db1f410a |
Full Path: | /mnt/galaxy/files/000/dataset_326.dat |
Input Parameter | Value | Note for rerun |
---|---|---|
Assembly method | De novo | |
Assembly type | Genome | |
Assembly quality grade | Accurate | |
Backbones/reference chromosomes? | false | |
Sanger/Capillary reads? | false | |
454 reads? | false | |
Solexa/Illumina reads? | false | |
Ion Torrent reads? | true | |
Ion Torrent reads file | 10: R_2011_10_19_14_30_56_user_SN1-36_Auto_SN1-36_38.fastq |
Dr Marija Tauschek/Atanaskovic
URL:
http://130.56.251.91/admin_toolshed/prepare_for_install?tool_shed_url=https://testtoolshed.g2.bx.psu.edu/&repository_ids=4dd4d179ddfb3445&changeset_revisions=aeb3e35f8236
Module
galaxy.web.framework.middleware.error:149 in __call__
>>
app_iter = self.application(environ,
sr_checker)
Module
paste.recursive:84 in __call__
>>
return self.application(environ,
start_response)
Module
paste.httpexceptions:633 in __call__
>>
return self.application(environ,
start_response)
Module
galaxy.web.framework.base:132 in __call__
>>
return self.handle_request(
environ, start_response
)
Module
galaxy.web.framework.base:190 in handle_request
>>
body = method(
trans, **kwargs
)
Module
galaxy.web.framework:369 in decorator
>>
return func(
self, trans,
*args, **kwargs
)
Module
galaxy.webapps.galaxy.controllers.admin_toolshed:983 in prepare_for_install
>>
includes_tool_dependencies )
Module
tool_shed.util.common_install_util:97 in get_dependencies_for_repository
>>
repository = suc.get_repository_for_dependency_relationship(
trans.app,
tool_shed_url, name,
repository_owner, changeset_revision
)
Module
tool_shed.util.shed_util_common:1036 in get_repository_for_dependency_relationship
>>
( name, owner,
changeset_revision ) )
Module
tool_shed.util.shed_util_common:1867 in url_join
>>
parts.append(
arg.strip(
'/' ) )
AttributeError: 'NoneType' object has no attribute 'strip'
extra data