I recommend checking out John Chilton's dynamic job runner first:
http://lists.bx.psu.edu/pipermail/galaxy-dev/2012-June/010080.html

-Scott


Hi, guys,

I would like to enable checkpoint and restart for some galaxy jobs. In order to do that, I need to add "-c enabled" option when using "qsub" to submit a job. What files should I change to add this option? I am using Torque PBS job runner.

Thanks,
Luobin


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