Hi all, I will appreciate your help in understanding the 'id' key returned from the API. I am using Galaxy Version 15.03 & bioblend Version 0.8.0. Example: I have highlighted the id and related fields with bold and red.
workflowClient.get_invocations('f7bb1edd6b95db62') [{u'inputs': {u'1': {u'src': u'hda', u'id': u'06d9fe130fbe098e'}}, u'update_time': u'2017-05-17T03:09:10', u'uuid': u'fd066a98-3aad-11e7-90e9-1cc1de6d5ef4', u'history_id': u'b8a0d6158b9961df', u'state': u'scheduled', *u'workflow_id': u'915ae9a80309f157'*, u'steps': ... u'model_class': u'WorkflowInvocation', *u'id': u'8c49be448cfe29bc'*}]
Why is the '*workflow_id*' different from the one I passed to the fucntion? And why is that '*workflow_id' *is not found anywhere in the return value?
historyClient.show_dataset(hid,'468b2dfe96a5a9a1') {u'accessible': True, u'resubmitted': False, u'create_time': u'2017-05-17T03:04:02', u'download_url': u'/api/histories/b8a0d6158b9961df/contents/468b2dfe96a5a9a1/display', u'file_size': 545, *u'dataset_id': u'56c890cbef28295c', u'id': u'468b2dfe96a5a9a1'*, u'misc_info': u'uploaded fastqsanger file', u'hda_ldda': u'hda', u'metadata_sequences': 5, u'state': u'ok', u'display_types': [], u'display_apps': [], u'type': u'file', u'file_path': None, u'misc_blurb': u'5 sequences', u'peek': u'<table cellspacing="0" cellpadding="3"><tr><td>@1</td></tr><tr><td>tccacaagccattgtgtgtaattaaccactaattgtgtataagtttaaact</td></tr><tr><td>+</td></tr><tr><td>IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII</td></tr><tr><td>@2</td></tr><tr><td>tccacaagccattgtgtgtaattaaccactaattgtgtataagtttaaact</td></tr></table>', u'update_time': u'2017-05-17T03:04:06', u'data_type': u'galaxy.datatypes.sequence.FastqSanger', u'tags': [], u'deleted': False, u'history_id': u'b8a0d6158b9961df', u'meta_files': [], u'genome_build': u'?', u'hid': 1, u'model_class': u'HistoryDatasetAssociation', u'metadata_data_lines': 20, u'file_ext': u'fastqsanger', u'annotation': None, u'metadata_dbkey': u'?', u'history_content_type': u'dataset', *u'name': u'a_1.fastq'*, u'extension': u'fastqsanger', u'visible': True, u'url': u'/api/histories/b8a0d6158b9961df/contents/468b2dfe96a5a9a1', u'uuid': u'aa6dcf49-6fe9-49e0-8064-c8bc275a37d5', u'visualizations': [], u'purged': False, u'api_type': u'file'}
historyClient.show_dataset(hid,'56c890cbef28295c') {u'accessible': True, u'resubmitted': False, u'create_time': u'2017-05-17T02:59:27', u'file_size': 64, *u'dataset_id': u'9ccf9e6f1cf4d1fa', u'id': u'56c890cbef28295c'*, u'misc_info': u'##fileformat=VCFv4.1\n##FILTER=<ID=PASS,Description="All filters passed">\n##fileDate=20170517\n##source=freeBayes v0.9.20\n##reference=localref.fa\n##phasing=none\n##commandline="freebayes --bam localbam_0.bam --fasta-reference localref.fa --vcf /home/sphadmi', u'hda_ldda': u'hda', u'download_url': u'/api/histories/06ec17aefa2d49dd/contents/56c890cbef28295c/display', u'state': u'ok', u'display_types': [], u'display_apps': [], u'type': u'file', u'file_path': None, u'misc_blurb': u'0 lines', u'peek': u'<table cellspacing="0" cellpadding="3"><tr><td>#Calculation and writing of high density regions has completed.</td></tr></table>', u'update_time': u'2017-05-17T02:59:36', u'data_type': u'galaxy.datatypes.data.Text', u'tags': [], u'deleted': False, u'history_id': u'06ec17aefa2d49dd', u'meta_files': [], u'genome_build': u'?', u'hid': 44, u'model_class': u'HistoryDatasetAssociation', u'metadata_data_lines': None, u'file_ext': u'txt', u'annotation': None, u'metadata_dbkey': u'?', u'history_content_type': u'dataset', *u'name': u'High density regions',* u'extension': u'txt', u'visible': False, u'url': u'/api/histories/06ec17aefa2d49dd/contents/56c890cbef28295c', u'uuid': u'8b8c70a4-cd2e-43d3-bc77-b06511557c96', u'visualizations': [], u'purged': False, u'api_type': u'file'}
Similarly, here the '*dataset_id' *is different from the one I passed to *show_dataset* method. If I check the '*dataset_id*' from first call, it points to another different file! Please let me know which of these 'id' should be used and what would be the purpose of the other id? Thanks for your help and time! Best, Aarthi