Hello,

I am still unable to upload a 5.2 GB Illumina dataset to the local instance of Galaxy. When atempting to upload as fastq file, the error sais Transfer is interrupted" with no additional information available. Whe attempting to upload using admin's "Upload directory of files" (after enabling the corresponding options in universe_wsgi.ini, the following error is generated"

Error attempting to display contents of library (SC datasets): (OperationalError) no such column: True u'SELECT dataset_permissions.id AS dataset_permissions_id, dataset_permissions.create_time AS dataset_permissions_create_time, dataset_permissions.update_time AS dataset_permissions_update_time, dataset_permissions.action AS dataset_permissions_action, dataset_permissions.dataset_id AS dataset_permissions_dataset_id, dataset_permissions.role_id AS dataset_permissions_role_id XnFROM dataset_permissions XnWHERE True AND dataset_permissions.action = ?' ['access'].

Finally I tried to upload a compressed fastq.gz file. It seem to finished uploading (green highlight turned to yellow), and some processing (unpacking?) ensued, but after a while another error was generated:

Traceback (most recent call last):
  File "/home/yaximik/galaxy-dist/tools/data_source/upload.py", line 384, in <module>
    __main__()
  File "/home/yaximik/galaxy-dist/tools/data_source/upload.py", line 373, in __main__
    add_file( dataset, registry, json_file, output_path )
  File "/home/yaximik/galaxy-dist/tools/data_source/upload.py", line 270, in add_file
    line_count, converted_path = sniff.convert_newlines( dataset.path, in_place=in_place )
  File "/home/yaximik/galaxy-dist/lib/galaxy/datatypes/sniff.py", line 98, in convert_newlines
    for i, line in enumerate( file( fname, "U" ) ):
IOError: [Errno 5] Input/output error

Why reporting is disabled from within this instance of Galaxy? KInda silly - there is suggestion to report the error to the developers' team and after long typing it says "Disabled". Having encountered that "joke" before I wisely copied the message content before "sending" it over (that is trashing in fact),  so I can send using outside email.

Vladimir