app_iter = application(environ, replacement_start_response) Module
return self.application(environ, start_response) Module
Hi devs, Sorry for the bad formating, here is the error I get when trying to reinstall a toolshed tool: Module paste.exceptions.errormiddleware:143 in __call__ >> app_iter = self.application(environ, start_response) Module paste.debug.prints:98 in __call__ >> environ, self.app) Module paste.wsgilib:539 in intercept_output paste.recursive:80 in __call__ paste.httpexceptions:632 in __call__
return self.application(environ, start_response) Module galaxy.web.framework.base:160 in __call__ body = method( trans, **kwargs ) Module galaxy.web.framework:184 in decorator return func( self, trans, *args, **kwargs ) Module galaxy.web.controllers.admin_toolshed:350 in browse_repositories return self.reselect_tool_panel_section( trans, **kwd ) Module galaxy.web.framework:184 in decorator return func( self, trans, *args, **kwargs ) Module galaxy.web.controllers.admin_toolshed:1352 in reselect_tool_panel_section status=status ) Module galaxy.web.framework:746 in fill_template return self.fill_template_mako( filename, **kwargs ) Module galaxy.web.framework:757 in fill_template_mako return template.render( **data ) Module mako.template:296 in render return runtime._render(self, self.callable_, args, data) Module mako.runtime:660 in _render **_kwargs_for_callable(callable_, data)) Module mako.runtime:692 in _render_context _exec_template(inherit, lclcontext, args=args, kwargs=kwargs) Module mako.runtime:718 in _exec_template callable_(context, *args, **kwargs) Module _base_mako:42 in render_body __M_writer(unicode(next.body())) Module _admin_tool_shed_repository_reselect_tool_panel_section_mako:76 in render_body __M_writer(unicode(render_tool_dependency_section( install_tool_dependencies_check_box, [ repo_info_dict ] ))) Module _admin_tool_shed_repository_common_mako:204 in render_render_tool_dependency_section changeset_revision ) Module posixpath:67 in join elif path == '' or path.endswith('/'): AttributeError: 'NoneType' object has no attribute 'endswith'
Any ideas would be greatly appretiated. Also, if the galaxy devs have any (as a last resort) mysql script to delete a tool affecting all the pertinent tables it would great. Thanks, Franco This email (including any attachments or links) may contain confidential and/or legally privileged information and is intended only to be read or used by the addressee. If you are not the intended addressee, any use, distribution, disclosure or copying of this email is strictly prohibited. Confidentiality and legal privilege attached to this email (including any attachments) are not waived or lost by reason of its mistaken delivery to you. If you have received this email in error, please delete it and notify us immediately by telephone or email. Peter MacCallum Cancer Centre provides no guarantee that this transmission is free of virus or that it has not been intercepted or altered and will not be liable for any delay in its receipt.