On Jan 2, 2014, at 11:09 AM, Jennifer Jackson <jen@bx.psu.edu>

wrote:

Hello Prakash,
I am going to move this over to the galaxy-dev@bx.psu.edu mailing list where it will have greater visibility within our development community.
Best,
Jen
Galaxy team
https://wiki.galaxyproject.org/MailingLists#The_lists

On 1/2/14 7:27 AM, Velayutham, Prakash (Prakash) wrote:
Hi,

We have a SSO environment provided by Oracle Fusion products and for some reason, they don't like to send over HTTP_REMOTE_USER as a header variable to downstream servers. I have seen it before with other web sites I have integrated with Oracle Access Manager. Is there a way Galaxy can accept another HEADER variable than REMOTE_USER for its external authentication?

As an extension:

With just enabling HTTP_REMOTE_USER as a header variable from an external authenticator, Galaxy works without any issues. I tried this with a default Apache/mod_ldap/mod_authnz_ldap setup.

However, when I mix the Oracle gateways into the mix, things break down.

I made OAM send HTTP_AUTH_USER over to Galaxy.

I changed all instances of REMOTE_USER to AUTH_USER in the installed location of Galaxy in my server.

Authentication works fine, but I get issues with HISTORY part of Galaxy (below), when I access a workflow or basically any part of Galaxy that depends on HISTORY

Error Traceback:

View as:   Interactive  |  Text  |  XML (full)

⇝ AttributeError: 'NoneType' object has no attribute 'user'

URL: http://xxx.xxx.xxx/dataset/list?sort=-update_time&f-name=All&f-tags=All&f-deleted=False

Module weberror.evalexception.middleware:364 in respond     <Mail Attachment.jpeg>     view
>>  app_iter = self.application(environ, detect_start_response)

Module paste.recursive:84 in __call__     <Mail Attachment.jpeg>     view
>>  return self.application(environ, start_response)

Module galaxy.web.framework.middleware.remoteuser:91 in __call__     <Mail Attachment.jpeg>     view
>>  return self.app( environ, start_response )

Module paste.httpexceptions:633 in __call__     <Mail Attachment.jpeg>     view
>>  return self.application(environ, start_response)

Module galaxy.web.framework.base:132 in __call__     <Mail Attachment.jpeg>     view
>>  return self.handle_request( environ, start_response )

Module galaxy.web.framework.base:190 in handle_request     <Mail Attachment.jpeg>     view
>>  body = method( trans, **kwargs )

Module galaxy.web.framework:98 in decorator     <Mail Attachment.jpeg>     view
>>  return func( self, trans, *args, **kwargs )

Module galaxy.webapps.galaxy.controllers.dataset:555 in list     <Mail Attachment.jpeg>     view
>>  status, message = self._copy_datasets( trans, hda_ids, target_histories )

Module galaxy.webapps.galaxy.controllers.dataset:1127 in _copy_datasets     <Mail Attachment.jpeg>     view
>>  if user != history.user:

AttributeError: 'NoneType' object has no attribute 'user'

Thanks,

Prakash
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