Hi Peter, The tool shed source is mostly in the following places. ~/lib/galaxy/webapps/community/ /lib/galaxy/tool_shed/ /lib/galaxy/util/shed_util_common.py /lib/galaxy/util/shed_util.py /template/webapps/community/ I'll get to this as soon as I can, but glad you're willing to take a look. Greg Von Kuster On Jan 29, 2013, at 11:04 AM, Peter Cock wrote:
On Mon, Jan 28, 2013 at 7:56 PM, Greg Von Kuster <greg@bx.psu.edu> wrote:
I've opened a Trello card, but it's in the Galaxy development project, so not sure if you can see it or not. Here's the link to the card just in case...
https://trello.com/card/nice-citable-urls-for-galaxy-tool-shed-repositories/...
I can't see that :(
I was wondering about taking a look at this to see how hard it would be - but my first query is where is the ToolShed source code?
My plan is/was to use this pattern:
http://toolshed.g2.bx.psu.edu/repository/username/ --> All tools by that username
http://toolshed.g2.bx.psu.edu/repository/username/toolname --> The given tool from that author
This would match the pattern for the the underlying hg repository, http://toolshed.g2.bx.psu.edu/repos/peterjc/mira_assembler
That would become this for the ToolShed entry: http://toolshed.g2.bx.psu.edu/repository/peterjc/mira_assembler
Thanks,
Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: