On Dec 29, 2011, at 12:15 AM, Cai Shaojiang wrote:
Dear friends,
We are trying to install galaxy on the server (ubuntu 11), just by following the steps on the page "Get Galaxy: Galaxy Download and Installation" of galaxy wiki. But when we start running it, it shows the following error message.
OperationalError: (OperationalError) unable to open database file u'INSERT INTO galaxy_session (create_time, update_time, user_id, remote_host, remote_addr, referer, current_history_id, session_key, is_valid, prev_session_id, disk_usage) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)' ['2011-12-29 04:52:46.575702', '2011-12-29 04:52:46.575719', None, '10.50.70.45', '10.50.70.45', None, None, '5a38b2a7e6d77a7145726cb0881eadf6', 1, None, None]
It seems something wrong with the write permission. Could you give any hint where the problem could be? Thanks.
Hi Cai, I've moved this over to the galaxy-dev list since it pertains to a local installation. Please make sure that the galaxy-dist/database/ directory is writable by the user running the Galaxy server. Also, if you plan to use this server for anything other than single-user development, I would suggest switching to a PostgreSQL server. This is trivial on Ubuntu (apt-get install postgresql, createuser/createdb, then edit universe_wsgi.ini as described at http://usegalaxy.org/production ). --ndate
Best regards.
Yours: Cai ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at: