15 May
2014
15 May
'14
3:40 p.m.
Hi, I've noticed that $GALAXY_SLOTS that was always set to 1 when using LSF. It turns out that LSF specifies the number of parallel slots using $LSB_DJOB_NUMPROC env variable which isn't checked in lib/galaxy/jobs/runners/util/job_script/CLUSTER_SLOTS_STATEMENT.sh. A diff that describes the fix is attached. Ilya