Hi Alexander, There is a -t for PeakRanger to indicate the number of threads. I don't think macs14 or macs2 can run on mutltiple cores - I am cc'ing Tao Lui, the author of macs, who can confirm this. Thanks, Q On Tue, Mar 26, 2013 at 6:15 AM, Alexander Kurze <alexander.kurze@gmail.com> wrote:
Hi there,
we have a 32 core server but I realised that a lot of programs are only using a fraction of that. I was able to adjust bowtie, bowtie2 and Tophat to use all of the cores but couldn't find an thread/core option for Macs14, Macs2 or PeakRanger. Does anyone know if these programs are capable of multi threading? If yes, where do I adjust it? Would be nice to have some global parameter set in the universewgsi.ini file.
Thanks,
Alex
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