---------- Forwarded message ---------- From: Roy Weckiewicz <roystefan@gmail.com> Date: Fri, Feb 19, 2010 at 1:31 PM Subject: Re: [galaxy-dev] Sqlite to MYSQL conversion in galaxy To: Nate Coraor <nate@bx.psu.edu> Thanks again Nate, I just tried the one you sent me - it seems I just have a database revision issue: Traceback (most recent call last): File "/Users/rsw3284/Downloads/galaxy-0c07212afc00/lib/galaxy/web/buildapp.py", line 61, in app_factory app = UniverseApplication( global_conf = global_conf, **kwargs ) File "/Users/rsw3284/Downloads/galaxy-0c07212afc00/lib/galaxy/app.py", line 28, in __init__ create_or_verify_database( db_url, self.config.database_engine_options ) File "/Users/rsw3284/Downloads/galaxy-0c07212afc00/lib/galaxy/model/migrate/check.py", line 72, in create_or_verify_database raise Exception( "Your database is older than hg revision 1464:c7acaa1bb88f and will need to be updated manually" ) Exception: Your database is older than hg revision 1464:c7acaa1bb88f and will need to be updated manually Rgds, Roy Weckiewicz On Fri, Feb 19, 2010 at 1:28 PM, Nate Coraor <nate@bx.psu.edu> wrote:

Roy Weckiewicz wrote:

What's strange is that eventhough the file name on the egg is

...

MySQL*fat-ucs2.egg the error still reports the file in question as MySQL*fat.egg -- I've tried renaming the egg to match the original file, but it didn't seem to make a difference. Furthermore, when I run.sh, the program will create a directory in home called .python-eggs/ containing the _MySQL.so file, among other things - Will I have to add a different URL to the eggs.ini to keep it from re-downloading the old file?

Ah, sorry, that egg relies on some uncommitted patches. I've rebuilt it using a clean checkout, could you try this one instead?:

http://www.bx.psu.edu/~nate/galaxy/MySQL_python-1.2.2_5.0.67_static-py2.5-ma...

Thanks, --nate

-- Roy Weckiewicz Texas A&M University -- Roy Weckiewicz Texas A&M University