Hi
I am running into a problem with the scripts/set_metadata.py file since the last update of galaxy-dist. In this script the name of the universe file is hard-coded as 'universe_wsgi.ini', see line 44:
config_file_name = 'universe_wsgi.ini' # Safe assumption?
I renamed the universe file in our setting, due to different Galaxy installs. Running the set_metadata.py script crashes however with this coding as it is constantly trying to make a tmpfile in './database/tmp' which is the default tmp path in universe_wsgi.ini. Replacing 'universe_wsgi.ini' by the name of our universe file solved the problem. So, how can I dynamically retrieve the name of the launched universe file?
Thx for any help regards Bram
On Feb 7, 2012, at 11:25 AM, Bram Slabbinck wrote:
Hi
I am running into a problem with the scripts/set_metadata.py file since the last update of galaxy-dist. In this script the name of the universe file is hard-coded as 'universe_wsgi.ini', see line 44:
config_file_name = 'universe_wsgi.ini' # Safe assumption?
I renamed the universe file in our setting, due to different Galaxy installs. Running the set_metadata.py script crashes however with this coding as it is constantly trying to make a tmpfile in './database/tmp' which is the default tmp path in universe_wsgi.ini. Replacing 'universe_wsgi.ini' by the name of our universe file solved the problem. So, how can I dynamically retrieve the name of the launched universe file?
Hi Bram,
Thanks for finding this. It's been fixed in changeset 6692:d0e5fa20e491.
--nate
Thx for any help regards Bram
--
Bram Slabbinck, PhD
Bioinformatics& Systems Biology Division VIB Department of Plant Systems Biology, UGent Technologiepark 927, 9052 Gent, BELGIUM
Email: Bram.Slabbinck@psb.ugent.be WWW: http://bioinformatics.psb.ugent.be ========================================================== Please consider the environment before printing this email
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