Hi there, I've been reading the last devnewsbrief... I've probably missed something, but I see that API should be available... where can I find docs about? thanks d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */
Davide Have a look at ~/galaxy_dist/scripts/api/README (I haven't used it yet) Hans On 10/06/2010 12:31 PM, Davide Cittaro wrote:
Hi there, I've been reading the last devnewsbrief... I've probably missed something, but I see that API should be available... where can I find docs about?
thanks
d /* Davide Cittaro
Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy
tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */
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On Oct 6, 2010, at 1:05 PM, Hans-Rudolf Hotz wrote:
Davide
Have a look at
~/galaxy_dist/scripts/api/README
Thanks! d
(I haven't used it yet)
Hans
On 10/06/2010 12:31 PM, Davide Cittaro wrote:
Hi there, I've been reading the last devnewsbrief... I've probably missed something, but I see that API should be available... where can I find docs about?
thanks
d /* Davide Cittaro
Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy
tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */
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/* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */
Davide; The API is awesome. We use it to do automated uploading of files to data libraries as part of our post-processing pipeline. In addition to the docs Hans pointed out, here's a Python class that abstracts out some of the url handling: http://github.com/chapmanb/bcbb/blob/master/nextgen/bcbio/galaxy/api.py and a script using it to do uploads: http://github.com/chapmanb/bcbb/blob/master/nextgen/scripts/upload_to_galaxy... Hope this helps, Brad
participants (3)
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Brad Chapman -
Davide Cittaro -
Hans-Rudolf Hotz