What kind of database backend are you using (postgres, myql, or the
If you are running many jobs - I would definitely encourage using postgres.
On Sun, Mar 13, 2016 at 2:48 PM, Zuzanna K. Filutowska
I am running newest version of Galaxy with PBS and I am observing
strange behaviour: some jobs that were finished on the queue system are
still shown as running on Galaxy Web interface. Communication with PBS
server seems to work fine all the time. Nothing interesting seems to be
in logs despite debug being on:
sqlalchemy.pool.QueuePool ERROR 2016-03-13 11:36:02,544 Error closing
Any ideas, what can be a problem?
Zuzanna K. Filutowska, HPC Systems Administrator
Poznan Supercomputing and Networking Center
Institute of Bioorganic Chemistry Polish Academy of Sciences
Seize the day boys! Make your lifes extraordinary! --John Keating
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