I'm glad it worked Chris, I'm keeping thread on the mailing list for future reference... -------- Original Message -------- Subject: Re: [galaxy-dev] DRMAA broken following SGE update. How to fix? Date: Tue, 23 Aug 2011 11:56:13 +0100 From: Chris Cole <chris@compbio.dundee.ac.uk> Organization: University of Dundee To: Roman Valls <brainstorm@nopcode.org> Hi, The SGE_ROOT variable was the same as always, but it turns out I had a DRMAA_LIBRARY_PATH path that was still pointing to the old path. It's such a long time since I set up galaxy that I'd forgotten about it. Changed it and Galaxy is working again. Thanks to you and Remy for pointing me in the right direction. Chris On 23/08/11 09:32, Roman Valls wrote:

Did you adjust the SGE_ROOT environment variable to point to the libdrmaa for SGE (probably /opt/sge_62u5_gr/bin/lx24-amd64) ?

This is of course just a guess, could you please provide some error messages/logs ?

Cheers, Roman

On 2011-08-23 10:20, Chris Cole wrote:

...

BUMP

Does anyone have any idea on this? Our Galaxy is currently out of action until this is sorted. Thanks,

Chris

On 22/08/11 10:08, Chris Cole wrote:

...

Hi,

Following a recent update to our SGE, DRMAA is failing to load in galaxy. The reason being that the path has changed. How do I change the path for galaxy to find the libdrmaa module? Cheers,

Chris

___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:

http://lists.bx.psu.edu/

---

Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:

http://lists.bx.psu.edu/