Brilliant! Thanks. That is exactly what I was looking for.
On May 24, 2015, at 4:49 AM, Björn Grüning <bjoern.gruening(a)gmail.com> wrote:
I'm a fan of learning by eyample, so please find attached the BRAT VIS :)
Put the folder into your ./config/plugins/visualizations/ folder and
restart Galaxy. You should see a new visualisation in every text
datatype in your Galaxy history. (We should change this later to JSON).
Have a look at the nlp_brat.xml file in config and the nlp_brat.mako
file. This is everything what you need to adopt or change if you want to
create a VIS.
Hope this helps,
Am 24.05.2015 um 02:45 schrieb Keith Suderman:
> I am looking for information, tips, and pointers on writing a component for
visualizing text data in Galaxy. In particular I would like to use Brat
) which can be embedded in web pages/apps. The
“Implementation Details” section on the Learn/Visualization page
) hints at
exactly what I want to do:
> - use AJAX to fetch JSON data.
> I can do both of the above steps, I am just not sure how to wire Brat into Galaxy.
All of the documentation I can find about visualization covers installing existing Genome
in Galaxy. I am hoping someone can sketch out the basic steps I need to accomplish before
I spend too much time grepping through the Galaxy code base.
> Research Associate
> Department of Computer Science
> Vassar College
> Poughkeepsie, NY
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Department of Computer Science