I have repository https://toolshed.g2.bx.psu.edu/repository/browse_repository?id=691d87250e824... When I try to update repository by uploading either tarball or single file, nothing happen - I got a blank page which never updates. When I explored the content of this repository it look like the content was updated partially - Toolshed still shows the revision number 0 but content of files visible through toolshed is updated. However, linked mercurial repository at https://petr-novak@toolshed.g2.bx.psu.edu/repos/petr-novak/repeat_annotation... does not have this update. So the content visible through tooshed interface different from content of hg repository. This is not a first time it happened, I have also other repositories which cannot be updated. Is it a bug or am I doing something wrong?
Petr
Hi Petr,
Have you tried using `planemo lint` to check that your tools are structurally correct and `planemo shed_update` ( https://planemo.readthedocs.io/en/latest/publishing.html) to upload repositories ? I'm afraid the upload interface of the tool shed currently only works if there are no issues in the tools or the tools' metadata, and most of the community has adapted to using continuous integration to test and upload tools. We have a template repository that you could adopt for this at https://github.com/galaxyproject/galaxy-tool-repository-template.
Best, Marius
On Mon, 24 Jan 2022 at 08:02, petr@umbr.cas.cz wrote:
I have repository https://toolshed.g2.bx.psu.edu/repository/browse_repository?id=691d87250e824... When I try to update repository by uploading either tarball or single file, nothing happen - I got a blank page which never updates. When I explored the content of this repository it look like the content was updated partially - Toolshed still shows the revision number 0 but content of files visible through toolshed is updated. However, linked mercurial repository at https://petr-novak@toolshed.g2.bx.psu.edu/repos/petr-novak/repeat_annotation... does not have this update. So the content visible through tooshed interface different from content of hg repository. This is not a first time it happened, I have also other repositories which cannot be updated. Is it a bug or am I doing something wrong?
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