First, when I try to upload a dataset with the Upload files from
filesystem paths option, I'm getting the following error:
Traceback (most recent call last): File "/share/galaxy/tools/
data_source/upload.py", line 414, in ? __main__() File "/share/
galaxy/tools/data_source/upload.py", line 389, in __main__
output_paths = parse_outputs( sys.argv[4:] ) File "/share/
Any ideas as to what might be wrong would be great!
Also, I think the following might be bugs.
1. I can log out twice and then I have to log in twice. When I log
out, galaxy goes to the analyze data tab rather than the login page
but it does say that I am logged out. The user tab however says that
I am logged in and gives me the option to log out again. If I
refresh the page it acts like I'm logged out and redirects to the
I am looking at these issues and will get back to you soon.
2. In the lims system, the order of the fields in the grid level for
when entering the information about a sample changes from the order
in the sample sequencing form.
Lastly I was wondering if it was changed on purpose so that a non-
admin user can change the information about a sample once the
sequencing request is submitted. It used to be that a regular user
could not edit data after they had submitted the sequencing request.
I am unable to reproduce this issue. Can you send me some screenshots
of the form definition and the sample grid when it appears out of order.