Please keep all replies on the list by using "reply all" - this way, others might be able to jump in and provide further help. Regards, Hans On 09/16/2012 09:25 AM, Edward Hills wrote:

Hi Hans,

Thanks for that however I need to do this programmatically without access to the UI. I am building a resource monitor / predictor for Galaxy and so need to know all the tools in the workflow before it executes and only from the command line.

Thanks, Ed

On Thu, Sep 13, 2012 at 6:59 PM, Hans-Rudolf Hotz <hrh@fmi.ch <mailto:hrh@fmi.ch>> wrote:

Hi Edward

Select 'view' instead of 'run' in your workflow list. This will give you a nice (human readable) overview of all the steps, or select the download option to get an xml describing your workflow.

Regards, Hans

On 09/13/2012 03:20 AM, Edward Hills wrote:

Hi Galaxy team,

I am wanting to know where to find the queue that stores all tool's that are going to be executed in the pipeline.

For example, I am running a workflow of 5 tools all linked together (the details are not important). Programatically I wish to know the names of the tools that are going to be run.

This is because I wish to perform some pre-run analysis on all the tools in the workflow before they get executed.

Thanks, Edward Hills

Department of Biochemistry, University of Otago, Dunedin, New Zealand.

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