Submitting Jobs as User
Hi, Galaxy Developers, I have a hopefully quick question regarding configuring Galaxy cluster integration; I've configured our universe_wsgi.ini to include the options specified in this document: http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Cluster#Submitting_Jobs_a... set_metadata_externally = True set_metadata_externally = True drmaa_external_runjob_script = scripts/drmaa_external_runner.py drmaa_external_killjob_script = scripts/drmaa_external_killer.py I have also given the galaxy account full sudo privileges. My question is that even after re-starting Galaxy and launching a job, when I schedule a job through galaxy, the job is still being scheduled as the galaxy user (if I run qstat, for example). Could anybody possibly provide some insight as to why this would be occurring? Do I need to set any other configuration options other than what I have specified above? Thank-you so much, Dan Sullivan
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Daniel Patrick Sullivan