Thanks Marius for your quick reply, I will check the yml and send you the full report once I have feedback from my sysadmin. Cheer Jochen On 23.07.19 10:03, Marius van den Beek wrote:

Hi Jochen,

can you post out the full logs ?

Jul 15 10:23:11 green-galaxy galaxy[5957]: yaml.scanner.ScannerError: mappin...e Jul 15 10:23:11 green-galaxy galaxy[5957]: in "/opt/galaxy/galaxy/config/gal...0

probably means that you have syntax error in galaxy.yml, but the full logs will tell you more.

Best, Marius

On Tue, 23 Jul 2019 at 09:26, Jochen Bick <jochen.bick@usys.ethz.ch <mailto:jochen.bick@usys.ethz.ch>> wrote:

Hi

since we updated some loc files our galaxy (19.01) does start but is unavailable in the browser.

# systemctl status galaxy ? galaxy.service - SYSV: Galaxy http://galaxyproject.org/    Loaded: loaded (/etc/rc.d/init.d/galaxy; bad; vendor preset: disabled)    Active: active (exited) since Mon 2019-07-15 10:23:11 CEST; 1 weeks 0 days ago      Docs: man:systemd-sysv-generator(8)   Process: 5840 ExecStop=/etc/rc.d/init.d/galaxy stop (code=exited, status=0/SUCCESS)   Process: 5957 ExecStart=/etc/rc.d/init.d/galaxy start (code=exited, status=0/SUCCESS)

Jul 15 10:23:11 green-galaxy galaxy[5957]: File "/opt/galaxy/galaxy/.venv/li...n Jul 15 10:23:11 green-galaxy galaxy[5957]: self.fetch_more_tokens() Jul 15 10:23:11 green-galaxy galaxy[5957]: File "/opt/galaxy/galaxy/.venv/li...s Jul 15 10:23:11 green-galaxy galaxy[5957]: return self.fetch_value() Jul 15 10:23:11 green-galaxy galaxy[5957]: File "/opt/galaxy/galaxy/.venv/li...e Jul 15 10:23:11 green-galaxy galaxy[5957]: self.get_mark()) Jul 15 10:23:11 green-galaxy galaxy[5957]: yaml.scanner.ScannerError: mappin...e Jul 15 10:23:11 green-galaxy galaxy[5957]: in "/opt/galaxy/galaxy/config/gal...0 Jul 15 10:23:11 green-galaxy galaxy[5957]: ...done. Jul 15 10:23:11 green-galaxy systemd[1]: Started SYSV: Galaxy http://galaxyp.... Hint: Some lines were ellipsized, use -l to show in full.

Has anyone a good hint?

Cheers Jochen

-- ETH Zurich *Jochen Bick* Animal Physiology Institute of Agricultural Sciences Postal address: Universitätstrasse 2 / LFW B 58.1 8092 Zurich, Switzerland Office: Eschikon 27 8315 Lindau, Switzerland

Phone +41 52 354 92 06 jochen.bick@usys.ethz.ch <mailto:jochen.bick@usys.ethz.ch> <mailto:jochen.bick@usys.ethz.ch <mailto:jochen.bick@usys.ethz.ch>> www.ap.ethz.ch <http://www.ap.ethz.ch>

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-- ETH Zurich *Jochen Bick* Animal Physiology Institute of Agricultural Sciences Postal address: Universitätstrasse 2 / LFW B 58.1 8092 Zurich, Switzerland Office: Eschikon 27 8315 Lindau, Switzerland Phone +41 52 354 92 06 jochen.bick@usys.ethz.ch <mailto:jochen.bick@usys.ethz.ch> www.ap.ethz.ch