Exporting worflow to local instal
Hi, I would like to download/export my workflows from the Galaxy main to a local install at my institution. When I use the URL method, I get the following error message: Data at 'http://main.g2.bx.psu.edu/u/muehlsch12/w/imported-tophat---cuffdiff-paired-e... ' does not appear to be a Galaxy workflow Message: No JSON object could be decoded: line 1 column 0 (char 0) When I want to download a workflow to my local machine, I get a server error (Duplicate headers received from server). The local install does not recognize publicly published workflows, so that step won't work either. Thanks for your help, Danny The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Hi Danny, For moving workflows from one instance to another you'll want to click on "Download or Export" in the workflow context menu and use the "URL for Importing to Another Galaxy". It looks something like this: (note the for_direct_import, that's how you'll know you have the right link type). https://main.g2.bx.psu.edu/workflow/for_direct_import?id=5214085ac1d2a9af And, the duplicate headers issue should be resolved on our main server now, please let us know if you find this isn't the case. -Dannon On Mar 14, 2012, at 12:13 PM, Muehlschlegel, Jochen D.,M.D. wrote:
Hi,
I would like to download/export my workflows from the Galaxy main to a local install at my institution. When I use the URL method, I get the following error message: Data at 'http://main.g2.bx.psu.edu/u/muehlsch12/w/imported-tophat---cuffdiff-paired-e... ' does not appear to be a Galaxy workflow
Message: No JSON object could be decoded: line 1 column 0 (char 0)
When I want to download a workflow to my local machine, I get a server error (Duplicate headers received from server).
The local install does not recognize publicly published workflows, so that step won't work either.
Thanks for your help,
Danny
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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participants (2)
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Dannon Baker
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Muehlschlegel, Jochen D.,M.D.