Hi all; I've been working on updating the bam_to_bigwig tool in the Toolshed with an improved wrapper from Peter and Lance:
http://toolshed.g2.bx.psu.edu/repository/view_repository?id=2498224736779bdb
I pushed updates to the mercurial repository and now the latest revision is at 3:294e9dae5a9b. However, the pull down menu under 'Repository revision' doesn't provide the option to get the more recent revisions. The most recent version is the older 1:0ff100a057ef.
Do I need to make any other changes to get the toolshed to recognize the updated revision? Apologies if I'm missing something obvious or have gotten out of sync. I'm trying to catch up on all the great toolshed improvements. Thanks much, Brad
Hi Brad,
I've fixed this for you, so the new changes are now available as a revision that can be installed. The problem that caused this is a temporary known issue on the tool shed. The mercurial version (egg) is out of date and will be updated with the next Galaxy dist release. The next Galaxy release is currently scheduled for Friday. so this problem will be fixed in the tool shed at that time.
Sorry for the hassle on this,
Greg Von Kuster
On Sep 6, 2012, at 5:59 AM, Brad Chapman wrote:
Hi all; I've been working on updating the bam_to_bigwig tool in the Toolshed with an improved wrapper from Peter and Lance:
http://toolshed.g2.bx.psu.edu/repository/view_repository?id=2498224736779bdb
I pushed updates to the mercurial repository and now the latest revision is at 3:294e9dae5a9b. However, the pull down menu under 'Repository revision' doesn't provide the option to get the more recent revisions. The most recent version is the older 1:0ff100a057ef.
Do I need to make any other changes to get the toolshed to recognize the updated revision? Apologies if I'm missing something obvious or have gotten out of sync. I'm trying to catch up on all the great toolshed improvements. Thanks much, Brad
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