Hello,
In a Galaxy tool, I would like to display a pre-completed path in the xml inputbox, inside the tool.xml file. Consequently, I would like to add a variable in an <param value="" /> tag , like this : <tool id="test" name="test" version=""> <command interpreter="sh">test.sh $in $out</command> <inputs> <param name="filepath" type="text" size="100" value="/work/$out" /> </inputs> ... and in test.sh : $out is defined to be ${trans.user.username}
Do you have any idea to display ${trans.user.username} variable in order to be shown in galaxy interface (gui) thanks to xml file ?
I achieve to display ${trans.user.username} in /templates/root/tool_menu.mako but not in the xml file.
Thanks in advance, Sarah
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