identify tool based on qstat name.
Hi, I would like to know what package/default tools is creating the jobs on our galaxy server like: 76905_CONVERTER_gff_to_fli_0_XXXXX@email.com I see these jobs in the pbs queue, and they use a lot of memory, up to 18Gb of Ram. Since I can't find the job in the tool configuration, I can't set the memory requirements in the job rules :-) Thanks, Geert -- Geert Vandeweyer, Ph.D. Department of Medical Genetics University of Antwerp Prins Boudewijnlaan 43 2650 Edegem Belgium Tel: +32 (0)3 275 97 56 E-mail: geert.vandeweyer@ua.ac.be http://ua.ac.be/cognitivegenetics http://www.linkedin.com/in/geertvandeweyer
Hi Geert, it is a converter, defined in datatypes_conf.xml, loacted in /lib/galaxy/datatypes/converters/gff_to_fli_converter.xml and with the id "CONVERTER_gff_to_fli_0". Cheers, Bjoern Am 09.05.2014 07:59, schrieb Geert Vandeweyer:
Hi,
I would like to know what package/default tools is creating the jobs on our galaxy server like:
76905_CONVERTER_gff_to_fli_0_XXXXX@email.com
I see these jobs in the pbs queue, and they use a lot of memory, up to 18Gb of Ram. Since I can't find the job in the tool configuration, I can't set the memory requirements in the job rules :-)
Thanks,
Geert
participants (2)
-
Björn Grüning
-
Geert Vandeweyer