[hg] galaxy 1727: Add fetch_eggs option to pull for other platfo...
details: http://www.bx.psu.edu/hg/galaxy/rev/e1e119b0bd17 changeset: 1727:e1e119b0bd17 user: Nate Coraor <nate@bx.psu.edu> date: Fri Jan 30 11:37:18 2009 -0500 description: Add fetch_eggs option to pull for other platforms (e.g. cluster nodes) 2 file(s) affected in this change: scripts/fetch_eggs.py scripts/get_platforms.py diffs (47 lines): diff -r 9a06f9910524 -r e1e119b0bd17 scripts/fetch_eggs.py --- a/scripts/fetch_eggs.py Tue Jan 27 17:12:04 2009 -0500 +++ b/scripts/fetch_eggs.py Fri Jan 30 11:37:18 2009 -0500 @@ -1,9 +1,13 @@ """ -usage: fetch_eggs.py [egg_name] +usage: fetch_eggs.py [egg_name] [platform] With no arguments, fetches all eggs necessary according to the settings in universe_wsgi.ini. egg_name - Fetch only this egg (as defined in eggs.ini) or 'all' for all eggs (even those not required by your settings). + platform - Fetch eggs for a specific platform (if not provided, fetch + eggs for *this* platform). Useful for fetching eggs for cluster + nodes which are of a different architecture than the head node. + Platform name can be determined with the get_platforms.py script. """ import os, sys, logging @@ -17,6 +21,8 @@ from galaxy.eggs import * c = Crate() +if len( sys.argv ) == 3: + c.platform = { 'peak' : sys.argv[2].rsplit('-',1)[0], 'galaxy' : sys.argv[2] } c.parse() try: if len( sys.argv ) == 1: diff -r 9a06f9910524 -r e1e119b0bd17 scripts/get_platforms.py --- a/scripts/get_platforms.py Tue Jan 27 17:12:04 2009 -0500 +++ b/scripts/get_platforms.py Fri Jan 30 11:37:18 2009 -0500 @@ -1,9 +1,12 @@ #!/usr/bin/env python -import sys +import os, sys assert sys.version_info[:2] >= ( 2, 4 ) -from eggs import get_full_platform, get_noplatform -print get_noplatform() -print get_full_platform() +lib = os.path.abspath( os.path.join( os.path.dirname( __file__ ), "..", "lib" ) ) +sys.path.append( lib ) + +from galaxy.eggs import get_platform +print get_platform() +print get_platform( True )
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Nate Coraor