Hi all, I run a local instance of galaxy. Today, I take a look at the system monitor, I found the galaxy just use 4% of a CPU and a little bit of the memory of the PC. But the PC has twelve CPUs and 126G memory. So, how to configure the galaxy to use more hardware resouces to calculate quickly?
If you did what the links posted previously suggested (inc. parallelization of tools, mutliple server processes), there is nothing more you can do. Most of the tools galaxy just calls, so its the tool that you have to change. Often genomic tools are also IO bound, so a faster storage system could lead to better CPU utilization - if this is the bottleneck. HTH, ido On Dec 10, 2012, at 9:51 AM, 泽 蔡 wrote:
Hi all,
I run a local instance of galaxy. Today, I take a look at the system monitor, I found the galaxy just use 4% of a CPU and a little bit of the memory of the PC. But the PC has twelve CPUs and 126G memory. So, how to configure the galaxy to use more hardware resouces to calculate quickly? ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
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Ido Tamir -
泽 蔡