Unfortunately Galaxy has no native support for scheduled jobs or
workflow executions like this. Pretty much all computation in Galaxy
is kicked off by user action or external interaction via the API. So
if you want to place the actual computation inside of Galaxy as a
workflow or a tool you can - then results can be gathered into
histories and visualized for instance and steps tracked - but the
scheduling of its execution would need to be executed by something
like a cron job triggering the API.
I'm not sure if I think Galaxy should add support for this or maybe
just make it easier to trigger such things via the API, but if you
think it should I'd encourage you to add an issue at
Sorry I don't have better news.
On Wed, Sep 13, 2017 at 9:26 AM, Mohamed Kassam <k.mamoud(a)gmail.com> wrote:
I made a tool that is doing analysis every two days and send me a
notification by email when the analyis is completed.
I would like to know if I can run this kind of job and how to integrate
this tool in Galaxy tools panel in Galaxy ? If someone has this experience
can help me.
Thanks in advance,
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