[hg] galaxy 2419: Add a hack to force UCSC links to be rewritten...
details: http://www.bx.psu.edu/hg/galaxy/rev/1acbcbcebeb3 changeset: 2419:1acbcbcebeb3 user: Nate Coraor <nate@bx.psu.edu> date: Wed May 27 11:15:35 2009 -0400 description: Add a hack to force UCSC links to be rewritten as http if your upstream uses https 1 file(s) affected in this change: lib/galaxy/datatypes/interval.py diffs (16 lines): diff -r 7414f90d7eae -r 1acbcbcebeb3 lib/galaxy/datatypes/interval.py --- a/lib/galaxy/datatypes/interval.py Tue May 26 16:35:23 2009 -0400 +++ b/lib/galaxy/datatypes/interval.py Wed May 27 11:15:35 2009 -0400 @@ -223,6 +223,12 @@ stop = viewport_tuple[2] for site_name, site_url in util.get_ucsc_by_build(dataset.dbkey): if site_name in app.config.ucsc_display_sites: + # HACK: UCSC doesn't support https, so force http even + # if our URL scheme is https. Making this work + # requires additional hackery in your upstream proxy. + # If UCSC ever supports https, remove this hack. + if base_url.startswith( 'https://' ): + base_url = base_url.replace( 'https', 'http', 1 ) display_url = urllib.quote_plus( "%s%s/display_as?id=%i&display_app=%s" % (base_url, url_for( controller='root' ), dataset.id, type) ) link = "%sdb=%s&position=%s:%s-%s&hgt.customText=%s" % (site_url, dataset.dbkey, chrom, start, stop, display_url ) ret_val.append( (site_name, link) )
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Greg Von Kuster