Hi everyone, Does anyone know where parameters are being retrieved from the database during tool execution within Galaxy's files. I am trying to change a value in the database after the value has been retrieved. Thanks! Katherine
Hi Katherine,
Check the 'job_parameter' table, though you'll need to find the correct job ID from the 'job' table.
Devon -- Devon Ryan, Ph.D. Email: dpryan@dpryan.com Data Manager/Bioinformatician Max Planck Institute of Immunobiology and Epigenetics Stübeweg 51 79108 Freiburg Germany
On Tue, Aug 30, 2016 at 2:35 PM, Katherine Beaulieu katherine.beaulieu014@gmail.com wrote:
Hi everyone, Does anyone know where parameters are being retrieved from the database during tool execution within Galaxy's files. I am trying to change a value in the database after the value has been retrieved. Thanks! Katherine
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Hi Devon, Thanks for the information! Do you know where in the code base Galaxy accesses these values for tool execution though? Cheers, Katherine
On Tue, Aug 30, 2016 at 8:44 AM, Devon Ryan dpryan@dpryan.com wrote:
Hi Katherine,
Check the 'job_parameter' table, though you'll need to find the correct job ID from the 'job' table.
Devon
Devon Ryan, Ph.D. Email: dpryan@dpryan.com Data Manager/Bioinformatician Max Planck Institute of Immunobiology and Epigenetics Stübeweg 51 79108 Freiburg Germany
On Tue, Aug 30, 2016 at 2:35 PM, Katherine Beaulieu katherine.beaulieu014@gmail.com wrote:
Hi everyone, Does anyone know where parameters are being retrieved from the database during tool execution within Galaxy's files. I am trying to change a
value
in the database after the value has been retrieved. Thanks! Katherine
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Hi Katherine,
That one's beyond me, sorry.
Devon -- Devon Ryan, Ph.D. Email: dpryan@dpryan.com Data Manager/Bioinformatician Max Planck Institute of Immunobiology and Epigenetics Stübeweg 51 79108 Freiburg Germany
On Tue, Aug 30, 2016 at 2:46 PM, Katherine Beaulieu katherine.beaulieu014@gmail.com wrote:
Hi Devon, Thanks for the information! Do you know where in the code base Galaxy accesses these values for tool execution though? Cheers, Katherine
On Tue, Aug 30, 2016 at 8:44 AM, Devon Ryan dpryan@dpryan.com wrote:
Hi Katherine,
Check the 'job_parameter' table, though you'll need to find the correct job ID from the 'job' table.
Devon
Devon Ryan, Ph.D. Email: dpryan@dpryan.com Data Manager/Bioinformatician Max Planck Institute of Immunobiology and Epigenetics Stübeweg 51 79108 Freiburg Germany
On Tue, Aug 30, 2016 at 2:35 PM, Katherine Beaulieu katherine.beaulieu014@gmail.com wrote:
Hi everyone, Does anyone know where parameters are being retrieved from the database during tool execution within Galaxy's files. I am trying to change a value in the database after the value has been retrieved. Thanks! Katherine
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
galaxy-dev@lists.galaxyproject.org
-
Devon Ryan -
Katherine Beaulieu