Hi Hans, Very sorry for the delay in response. The sample file that was included was incorrect, but has been updated in changeset 5775:4220f8a5c571 and should now display an interface. If you would like to use or run the tool, you may find $GALAXY_ROOT/scripts/tools/annotation_profiler/README.txt helpful. Please let us know if you encounter further difficulties. Thanks for using Galaxy, Dan On Jun 8, 2011, at 8:10 AM, Hans-Rudolf Hotz wrote: > Hi > > we are looking into different methods to display dynamic contents in the tool user interface. > > To start, we looked at the 'Operate on Genomic Intervals:Profile Annotations' tool. We turned it on in a local installation (May 20, "8c11dd28a3cf" release), but we struggled to get the interface to work. > > > On 'http://main.g2.bx.psu.edu/', the tables to choose from are only displayed if there is a history item with: "format: bed, database: hg18". > > But in our local test installation, we don't get the list of tables, no matter whether we have a ('hg18') bed file in our history or not. It looks like as if the 'from_file="annotation_profiler_options.xml"' statement in the "annotation_profiler.xml" is ignored. > > I know, the file 'annotation_profiler_options.xml' is read, since I get an error during restart, if I provide invalid xml. > > Is there anything else, I have to enable, in order to get this interface to work? Currently, I don't care about the tools functionality, I just want the (cool) interface to work. > > > Thank you very much for your help. > > > Regards, Hans > > > > PS: this question is connected to Tim's question yesterday - I just > should have sent mine first - sorry. > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > > http://lists.bx.psu.edu/