Internal Server Error on metadata reset
I am trying to reset metadata on all my repositories at once using the "Reset metadata on my repositories" button on https://testtoolshed.g2.bx.psu.edu/ It fails with: Internal Server Error Galaxy was unable to successfully complete your request URL: http://testtoolshed.g2.bx.psu.edu/repository/reset_metadata_on_my_writable_r... Module galaxy.web.framework.middleware.error:149 in __call__
app_iter = self.application(environ, sr_checker) Module paste.debug.prints:106 in __call__ environ, self.app) Module paste.wsgilib:543 in intercept_output app_iter = application(environ, replacement_start_response) Module paste.recursive:84 in __call__ return self.application(environ, start_response) Module paste.httpexceptions:633 in __call__ return self.application(environ, start_response) Module galaxy.web.framework.base:132 in __call__ return self.handle_request( environ, start_response ) Module galaxy.web.framework.base:190 in handle_request body = method( trans, **kwargs ) Module galaxy.webapps.tool_shed.controllers.repository:2795 inreset_metadata_on_my_writable_repositories_in_tool_shed my_writable=True ) Module tool_shed.metadata.repository_metadata_manager:65 in build_repository_ids_select_field query = self.get_query_for_setting_metadata_on_repositories( my_writable=my_writable,order=True ) Module tool_shed.metadata.repository_metadata_manager:513 in get_query_for_setting_metadata_on_repositories .filter( or_( *clause_list ) ) NameError: global name 'or_' is not defined extra data
Seems like missing import: from galaxy.model.orm import or_ I will check on it tomorrow as a whole. Thanks for reporting this. M. On Tue, Oct 7, 2014 at 7:03 PM, Saket Choudhary <saketkc@gmail.com> wrote:
I am trying to reset metadata on all my repositories at once using the "Reset metadata on my repositories" button on https://testtoolshed.g2.bx.psu.edu/ It fails with:
Internal Server Error
Galaxy was unable to successfully complete your request
URL: http://testtoolshed.g2.bx.psu.edu/repository/reset_metadata_on_my_writable_r... Module galaxy.web.framework.middleware.error:149 in __call__
app_iter = self.application(environ, sr_checker) Module paste.debug.prints:106 in __call__ environ, self.app) Module paste.wsgilib:543 in intercept_output app_iter = application(environ, replacement_start_response) Module paste.recursive:84 in __call__ return self.application(environ, start_response) Module paste.httpexceptions:633 in __call__ return self.application(environ, start_response) Module galaxy.web.framework.base:132 in __call__ return self.handle_request( environ, start_response ) Module galaxy.web.framework.base:190 in handle_request body = method( trans, **kwargs ) Module galaxy.webapps.tool_shed.controllers.repository:2795 inreset_metadata_on_my_writable_repositories_in_tool_shed my_writable=True ) Module tool_shed.metadata.repository_metadata_manager:65 in build_repository_ids_select_field query = self.get_query_for_setting_metadata_on_repositories( my_writable=my_writable,order=True ) Module tool_shed.metadata.repository_metadata_manager:513 in get_query_for_setting_metadata_on_repositories .filter( or_( *clause_list ) ) NameError: global name 'or_' is not defined extra data
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participants (2)
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Martin Čech -
Saket Choudhary