Hi Galaxy dev team, I'm trying to the you galaxy server to do NGS peak calling: Tools -> NGS: Peak Calling -> MACS<https://main.g2.bx.psu.edu/tool_runner?tool_id=peakcalling_macs> Model-based Analysis of ChIP-Seq. However, the page won't allow me enter the input files: the drop-down selection box won't show anything when clicked. Same problem for the ChIP-Seq Control File selection box. Please take a look and email me back if problem is fixed. Jianxin Wang, PhD Computational Biologist jianxin.wang@oicr.on.ca Ontario Institute for Cancer Research MaRS Centre, South Tower 101 College Street, Suite 800 Toronto, Ontario, Canada M5G 0A3 Tel: 416-673-8569 www.oicr.on.ca<http://www.oicr.on.ca> This message and any attachments may contain confidential and/or privileged information for the sole use of the intended recipient. Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. If you have received this message in error, please contact the sender and delete all copies. Opinions, conclusions or other information contained in this message may not be that of the organization.
What format are the files you are trying to process with MACS in? -- James Taylor, Assistant Professor, Biology/CS, Emory University On Tue, Jul 23, 2013 at 3:05 PM, Jianxin Wang <Jianxin.Wang@oicr.on.ca> wrote:
Hi Galaxy dev team,
I'm trying to the you galaxy server to do NGS peak calling: Tools -> NGS: Peak Calling -> MACS Model-based Analysis of ChIP-Seq. However, the page won't allow me enter the input files: the drop-down selection box won't show anything when clicked. Same problem for the ChIP-Seq Control File selection box. Please take a look and email me back if problem is fixed.
Jianxin Wang, PhD Computational Biologist jianxin.wang@oicr.on.ca
Ontario Institute for Cancer Research MaRS Centre, South Tower 101 College Street, Suite 800 Toronto, Ontario, Canada M5G 0A3
Tel: 416-673-8569 www.oicr.on.ca
This message and any attachments may contain confidential and/or privileged information for the sole use of the intended recipient. Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. If you have received this message in error, please contact the sender and delete all copies. Opinions, conclusions or other information contained in this message may not be that of the organization.
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James Taylor -
Jianxin Wang