Dear all,
This is the content of my workflow_step_connection table: +----+----------------+---------------+-------------+------------+ | id | output_step_id | input_step_id|output_name|input_name | +----+----------------+---------------+-------------+------------+ | 1 | 1 | 2 | output | input_file | 2 | 3 | 4 | output | input_file | | 3 | 4 | 5 | output_file | input_file | | 4 | 7 | 6 | output_file | input_file | | 5 | 8 | 7 | output | input_file | | 6 | 6 | 9 | output_file | input_file | +----+----------------+---------------+-------------+------------+
How is output_step_id and input_step_id is assigned? Can someone explain me how's connection is build? Thanks
output_step_id and input_step_id are both foreign keys to the workflow step table.
For example, the first row defines a connection between the output named "output" of workflow_step id=1 to the input named "input_file" of the workflow_step with id=2. The input and output names come from the tool associated with the workflow_step.
-- James Taylor, Assistant Professor, Biology/CS, Emory University
On Tue, Jan 1, 2013 at 6:21 AM, Sachit Adhikari sachit.technerves@gmail.com wrote:
Dear all,
This is the content of my workflow_step_connection table: +----+----------------+---------------+-------------+------------+ | id | output_step_id | input_step_id|output_name|input_name | +----+----------------+---------------+-------------+------------+ | 1 | 1 | 2 | output | input_file | 2 | 3 | 4 | output | input_file | | 3 | 4 | 5 | output_file | input_file | | 4 | 7 | 6 | output_file | input_file | | 5 | 8 | 7 | output | input_file | | 6 | 6 | 9 | output_file | input_file | +----+----------------+---------------+-------------+------------+
How is output_step_id and input_step_id is assigned? Can someone explain me how's connection is build? Thanks
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
Ok. So they are the foreign key from which table? Or the same table workflow_step_connection?
On Wed, Jan 2, 2013 at 9:04 PM, James Taylor james@jamestaylor.org wrote:
output_step_id and input_step_id are both foreign keys to the workflow step table.
For example, the first row defines a connection between the output named "output" of workflow_step id=1 to the input named "input_file" of the workflow_step with id=2. The input and output names come from the tool associated with the workflow_step.
-- James Taylor, Assistant Professor, Biology/CS, Emory University
On Tue, Jan 1, 2013 at 6:21 AM, Sachit Adhikari sachit.technerves@gmail.com wrote:
Dear all,
This is the content of my workflow_step_connection table: +----+----------------+---------------+-------------+------------+ | id | output_step_id | input_step_id|output_name|input_name | +----+----------------+---------------+-------------+------------+ | 1 | 1 | 2 | output | input_file | 2 | 3 | 4 | output | input_file | | 3 | 4 | 5 | output_file | input_file | | 4 | 7 | 6 | output_file | input_file | | 5 | 8 | 7 | output | input_file | | 6 | 6 | 9 | output_file | input_file | +----+----------------+---------------+-------------+------------+
How is output_step_id and input_step_id is assigned? Can someone explain
me
how's connection is build? Thanks
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To the "workflow_step" table.
-- James Taylor, Assistant Professor, Biology/CS, Emory University
On Wed, Jan 2, 2013 at 10:48 AM, Sachit Adhikari sachit.technerves@gmail.com wrote:
Ok. So they are the foreign key from which table? Or the same table workflow_step_connection?
On Wed, Jan 2, 2013 at 9:04 PM, James Taylor james@jamestaylor.org wrote:
output_step_id and input_step_id are both foreign keys to the workflow step table.
For example, the first row defines a connection between the output named "output" of workflow_step id=1 to the input named "input_file" of the workflow_step with id=2. The input and output names come from the tool associated with the workflow_step.
-- James Taylor, Assistant Professor, Biology/CS, Emory University
On Tue, Jan 1, 2013 at 6:21 AM, Sachit Adhikari sachit.technerves@gmail.com wrote:
Dear all,
This is the content of my workflow_step_connection table: +----+----------------+---------------+-------------+------------+ | id | output_step_id | input_step_id|output_name|input_name | +----+----------------+---------------+-------------+------------+ | 1 | 1 | 2 | output | input_file | 2 | 3 | 4 | output | input_file | | 3 | 4 | 5 | output_file | input_file | | 4 | 7 | 6 | output_file | input_file | | 5 | 8 | 7 | output | input_file | | 6 | 6 | 9 | output_file | input_file | +----+----------------+---------------+-------------+------------+
How is output_step_id and input_step_id is assigned? Can someone explain me how's connection is build? Thanks
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
Oh Alright. Thanks James!
On Wed, Jan 2, 2013 at 9:34 PM, James Taylor james@jamestaylor.org wrote:
To the "workflow_step" table.
-- James Taylor, Assistant Professor, Biology/CS, Emory University
On Wed, Jan 2, 2013 at 10:48 AM, Sachit Adhikari sachit.technerves@gmail.com wrote:
Ok. So they are the foreign key from which table? Or the same table workflow_step_connection?
On Wed, Jan 2, 2013 at 9:04 PM, James Taylor james@jamestaylor.org
wrote:
output_step_id and input_step_id are both foreign keys to the workflow step table.
For example, the first row defines a connection between the output named "output" of workflow_step id=1 to the input named "input_file" of the workflow_step with id=2. The input and output names come from the tool associated with the workflow_step.
-- James Taylor, Assistant Professor, Biology/CS, Emory University
On Tue, Jan 1, 2013 at 6:21 AM, Sachit Adhikari sachit.technerves@gmail.com wrote:
Dear all,
This is the content of my workflow_step_connection table: +----+----------------+---------------+-------------+------------+ | id | output_step_id | input_step_id|output_name|input_name | +----+----------------+---------------+-------------+------------+ | 1 | 1 | 2 | output | input_file | 2 | 3 | 4 | output | input_file | | 3 | 4 | 5 | output_file | input_file | | 4 | 7 | 6 | output_file | input_file | | 5 | 8 | 7 | output | input_file | | 6 | 6 | 9 | output_file | input_file | +----+----------------+---------------+-------------+------------+
How is output_step_id and input_step_id is assigned? Can someone
explain
me how's connection is build? Thanks
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
galaxy-dev@lists.galaxyproject.org