Thanks so much, John! Our webapp host is different than the Galaxy host. But I found a way to do it that avoids cross-side scripting via Spring MVC on the server side. So this is possible. Best, Oren On 11/14/2011 12:02 PM, Duddy, John wrote:

You can put it in an iframe, and if you are serving it from the same host as your main app, you can also inject javascript/CSS to control certain aspects, such as styling and event propagation related to navigation.

However, this is not a trivial exercise.

John Duddy Sr. Staff Software Engineer Illumina, Inc. 9885 Towne Centre Drive San Diego, CA 92121 Tel: 858-736-3584 E-mail: jduddy@illumina.com

-----Original Message----- From: galaxy-dev-bounces@lists.bx.psu.edu [mailto:galaxy-dev-bounces@lists.bx.psu.edu] On Behalf Of Oren Livne Sent: Friday, November 11, 2011 5:32 PM To: galaxy-dev@lists.bx.psu.edu Subject: [galaxy-dev] Galaxy in a frame?

Dear All,

We are trying to integrate Galaxy with our web app, and we thought of having our web app as the main front end, and allow users to open an HTML frame with Galaxy in it within that app. However, Galaxy makes it impossible - it takes over the entire page when a user logs in or clicks on most links. Is it possible to embed Galaxy in another webapp or is it only designed as a standalone app?

Thanks so much, Oren ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:

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