[hg] galaxy 1631: Missed translating the primaryTable data type ...
details: http://www.bx.psu.edu/hg/galaxy/rev/a39afe99b3bd changeset: 1631:a39afe99b3bd user: Greg Von Kuster <greg@bx.psu.edu> date: Thu Nov 13 15:17:42 2008 -0500 description: Missed translating the primaryTable data type from UCSC in my last commit. 3 file(s) affected in this change: tools/data_source/ucsc_tablebrowser.xml tools/data_source/ucsc_tablebrowser_archaea.xml tools/data_source/ucsc_tablebrowser_test.xml diffs (33 lines): diff -r 311ee61dc989 -r a39afe99b3bd tools/data_source/ucsc_tablebrowser.xml --- a/tools/data_source/ucsc_tablebrowser.xml Thu Nov 13 14:56:33 2008 -0500 +++ b/tools/data_source/ucsc_tablebrowser.xml Thu Nov 13 15:17:42 2008 -0500 @@ -23,6 +23,7 @@ <request_param galaxy_name="description" remote_name="hgta_regionType" missing="no description" /> <request_param galaxy_name="data_type" remote_name="hgta_outputType" missing="bed" > <data_type_translation> + <format galaxy_format="tabular" remote_format="primaryTable" /> <format galaxy_format="tabular" remote_format="selectedFields" /> </data_type_translation> </request_param> diff -r 311ee61dc989 -r a39afe99b3bd tools/data_source/ucsc_tablebrowser_archaea.xml --- a/tools/data_source/ucsc_tablebrowser_archaea.xml Thu Nov 13 14:56:33 2008 -0500 +++ b/tools/data_source/ucsc_tablebrowser_archaea.xml Thu Nov 13 15:17:42 2008 -0500 @@ -23,6 +23,7 @@ <request_param galaxy_name="description" remote_name="hgta_regionType" missing="" /> <request_param galaxy_name="data_type" remote_name="hgta_outputType" missing="bed" > <data_type_translation> + <format galaxy_format="tabular" remote_format="primaryTable" /> <format galaxy_format="tabular" remote_format="selectedFields" /> </data_type_translation> </request_param> diff -r 311ee61dc989 -r a39afe99b3bd tools/data_source/ucsc_tablebrowser_test.xml --- a/tools/data_source/ucsc_tablebrowser_test.xml Thu Nov 13 14:56:33 2008 -0500 +++ b/tools/data_source/ucsc_tablebrowser_test.xml Thu Nov 13 15:17:42 2008 -0500 @@ -23,6 +23,7 @@ <request_param galaxy_name="description" remote_name="hgta_regionType" missing="" /> <request_param galaxy_name="data_type" remote_name="hgta_outputType" missing="bed" > <data_type_translation> + <format galaxy_format="tabular" remote_format="primaryTable" /> <format galaxy_format="tabular" remote_format="selectedFields" /> </data_type_translation> </request_param>
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Greg Von Kuster