Hi. Getting error when trying to install the latest Galaxy on a new stand alone linux RH server. Is the repository down? migrate.versioning.repository DEBUG 2013-07-16 14:14:46,235 Config: {'db_settings': {'__name__': 'db_settings', 'required_dbs': '[]', 'version_table': 'migrate_tools', 'repository_id': ' GalaxyTools'}} tool_shed.galaxy_install.migrate.check DEBUG 2013-07-16 14:14:46,240 psycopg2 egg successfully loaded for postgres dialect The URL http://toolshed.g2.bx.psu.edu/repository/get_tool_dependencies?name=bowtie_wrappers&owner=devteam&changeset_revision=0c7e4eadfb3c&from_install_manager=True raised the exception: <urlopen error [Errno 110] Connection timed out> The URL http://toolshed.g2.bx.psu.edu/repository/get_tool_dependencies?name=bowtie_color_wrappers&owner=devteam&changeset_revision=fd0914e451c5&from_install_manager=True raised the exception: <urlopen error [Errno 110] Connection timed out> The URL http://toolshed.g2.bx.psu.edu/repository/get_tool_dependencies?name=lastz&owner=devteam&changeset_revision=0801f8207d30&from_install_manager=True raised the exception: <urlopen error [Errno 110] Connection timed out> The URL http://toolshed.g2.bx.psu.edu/repository/get_tool_dependencies?name=lastz_paired_reads&owner=devteam&changeset_revision=96825cee5c25&from_install_manager=True raised the exception: <urlopen error [Errno 110] Connection timed out> Traceback (most recent call last): ....... return tool_shed_accessible, missing_tool_configs_dict UnboundLocalError: local variable 'missing_tool_configs_dict' referenced before assignment Regards, Linda
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Linda Cham