Ahoj Martine,
thanks for your response. That was a pretty stupid mistake, hard to notice even though I program in Python. However, this has not solved my problem, I get the same error. (I have also made sure that it is in the right section.)
Jan
2013/9/25 Martin Čech emulatorer@gmail.com
Ahoj Honzo,
Python is case-sensitive. Use 'use_pbkdf2 = False' and make sure you put it under the '[app:main]' section in the config file.
Enjoy Galaxy!
best
Martin Cech
On Wed, Sep 25, 2013 at 9:15 AM, Jan Hapala jan@hapala.cz wrote:
Hi,
I need to run Galaxy with ProFTPd, therefore I need to disable the PBKDF2 encryption of the passwords (as stated here http://dev.list.galaxyproject.org/disable-PBKDF2-revert-to-SHA1-td4661274.ht... ).
However, when I do add this line: use_pbkdf2 = false to the universe_wsgi.ini, restart Galaxy, submit the form for the password change (or register as a new user) I get an error "_hashlib.HASH object has no attribute __getitem__".
I got the same result with a version as of Jul 2 and the most recent tag (10411:c42567f43aa7, Aug 19).
I would be much grateful for your suggestions!
Regards, Jan
URL: http://127.0.0.1:8080/user/edit_info?cntrller=user&user_id=f2db41e1fa331... File '.../eggs/WebError-0.8a-py2.7.egg/weberror/evalexception/middleware.py', line 364 in respond app_iter = self.application(environ, detect_start_response) File '.../eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response) File '.../eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response) File '.../lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response ) File '.../lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs ) File '.../lib/galaxy/webapps/galaxy/controllers/user.py', line 842 in edit_info trans.sa_session.flush() File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/scoping.py', line 114 in do File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/session.py', line 1718 in flush File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/session.py', line 1789 in _flush File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/unitofwork.py', line 331 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/unitofwork.py', line 475 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/persistence.py', line 59 in save_obj File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/persistence.py', line 485 in _emit_update_statements File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1449 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1584 in _execute_clauseelement File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1651 in _execute_context File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1647 in _execute_context File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/default.py', line 475 in _init_compiled File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/types.py', line 626 in process File '.../lib/galaxy/model/custom_types.py', line 125 in process_bind_param value = value[0:self.impl.length] StatementError: '_hashlib.HASH' object has no attribute '__getitem__' (original cause: TypeError: '_hashlib.HASH' object has no attribute '__getitem__') 'UPDATE galaxy_user SET update_time=%(update_time)s, password=%(password)s WHERE galaxy_user.id = %(galaxy_user_id)s' [{u'galaxy_user_id': 1, 'password': <sha1 HASH object @ 0x7338bc0>}]
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Jan,
It works for me with the newest galaxy-central version. I registered new user without a problem having the pbkdf2 turned off.
What version are you using now?
Martin
On Thu, Sep 26, 2013 at 4:02 AM, Jan Hapala jan@hapala.cz wrote:
Ahoj Martine,
thanks for your response. That was a pretty stupid mistake, hard to notice even though I program in Python. However, this has not solved my problem, I get the same error. (I have also made sure that it is in the right section.)
Jan
2013/9/25 Martin Čech emulatorer@gmail.com
Ahoj Honzo,
Python is case-sensitive. Use 'use_pbkdf2 = False' and make sure you put it under the '[app:main]' section in the config file.
Enjoy Galaxy!
best
Martin Cech
On Wed, Sep 25, 2013 at 9:15 AM, Jan Hapala jan@hapala.cz wrote:
Hi,
I need to run Galaxy with ProFTPd, therefore I need to disable the PBKDF2 encryption of the passwords (as stated here http://dev.list.galaxyproject.org/disable-PBKDF2-revert-to-SHA1-td4661274.ht... ).
However, when I do add this line: use_pbkdf2 = false to the universe_wsgi.ini, restart Galaxy, submit the form for the password change (or register as a new user) I get an error "_hashlib.HASH object has no attribute __getitem__".
I got the same result with a version as of Jul 2 and the most recent tag (10411:c42567f43aa7, Aug 19).
I would be much grateful for your suggestions!
Regards, Jan
URL: http://127.0.0.1:8080/user/edit_info?cntrller=user&user_id=f2db41e1fa331... File '.../eggs/WebError-0.8a-py2.7.egg/weberror/evalexception/middleware.py', line 364 in respond app_iter = self.application(environ, detect_start_response) File '.../eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response) File '.../eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response) File '.../lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response ) File '.../lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs ) File '.../lib/galaxy/webapps/galaxy/controllers/user.py', line 842 in edit_info trans.sa_session.flush() File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/scoping.py', line 114 in do File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/session.py', line 1718 in flush File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/session.py', line 1789 in _flush File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/unitofwork.py', line 331 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/unitofwork.py', line 475 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/persistence.py', line 59 in save_obj File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/persistence.py', line 485 in _emit_update_statements File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1449 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1584 in _execute_clauseelement File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1651 in _execute_context File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1647 in _execute_context File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/default.py', line 475 in _init_compiled File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/types.py', line 626 in process File '.../lib/galaxy/model/custom_types.py', line 125 in process_bind_param value = value[0:self.impl.length] StatementError: '_hashlib.HASH' object has no attribute '__getitem__' (original cause: TypeError: '_hashlib.HASH' object has no attribute '__getitem__') 'UPDATE galaxy_user SET update_time=%(update_time)s, password=%(password)s WHERE galaxy_user.id = %(galaxy_user_id)s' [{u'galaxy_user_id': 1, 'password': <sha1 HASH object @ 0x7338bc0>}]
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
I could not find a "Galaxy version" in the application but speaking about hg, it is Aug 19 (10411:c42567f43aa7). Jan
2013/9/26 Martin Čech marten@bx.psu.edu
Jan,
It works for me with the newest galaxy-central version. I registered new user without a problem having the pbkdf2 turned off.
What version are you using now?
Martin
On Thu, Sep 26, 2013 at 4:02 AM, Jan Hapala jan@hapala.cz wrote:
Ahoj Martine,
thanks for your response. That was a pretty stupid mistake, hard to notice even though I program in Python. However, this has not solved my problem, I get the same error. (I have also made sure that it is in the right section.)
Jan
2013/9/25 Martin Čech emulatorer@gmail.com
Ahoj Honzo,
Python is case-sensitive. Use 'use_pbkdf2 = False' and make sure you put it under the '[app:main]' section in the config file.
Enjoy Galaxy!
best
Martin Cech
On Wed, Sep 25, 2013 at 9:15 AM, Jan Hapala jan@hapala.cz wrote:
Hi,
I need to run Galaxy with ProFTPd, therefore I need to disable the PBKDF2 encryption of the passwords (as stated here http://dev.list.galaxyproject.org/disable-PBKDF2-revert-to-SHA1-td4661274.ht... ).
However, when I do add this line: use_pbkdf2 = false to the universe_wsgi.ini, restart Galaxy, submit the form for the password change (or register as a new user) I get an error "_hashlib.HASH object has no attribute __getitem__".
I got the same result with a version as of Jul 2 and the most recent tag (10411:c42567f43aa7, Aug 19).
I would be much grateful for your suggestions!
Regards, Jan
URL: http://127.0.0.1:8080/user/edit_info?cntrller=user&user_id=f2db41e1fa331... File '.../eggs/WebError-0.8a-py2.7.egg/weberror/evalexception/middleware.py', line 364 in respond app_iter = self.application(environ, detect_start_response) File '.../eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response) File '.../eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response) File '.../lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response ) File '.../lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs ) File '.../lib/galaxy/webapps/galaxy/controllers/user.py', line 842 in edit_info trans.sa_session.flush() File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/scoping.py', line 114 in do File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/session.py', line 1718 in flush File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/session.py', line 1789 in _flush File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/unitofwork.py', line 331 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/unitofwork.py', line 475 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/persistence.py', line 59 in save_obj File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/persistence.py', line 485 in _emit_update_statements File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1449 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1584 in _execute_clauseelement File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1651 in _execute_context File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1647 in _execute_context File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/default.py', line 475 in _init_compiled File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/types.py', line 626 in process File '.../lib/galaxy/model/custom_types.py', line 125 in process_bind_param value = value[0:self.impl.length] StatementError: '_hashlib.HASH' object has no attribute '__getitem__' (original cause: TypeError: '_hashlib.HASH' object has no attribute '__getitem__') 'UPDATE galaxy_user SET update_time=%(update_time)s, password=%(password)s WHERE galaxy_user.id = %(galaxy_user_id)s' [{u'galaxy_user_id': 1, 'password': <sha1 HASH object @ 0x7338bc0>}]
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Jan,
I just ran it on pure galaxy-dist (https://bitbucket.org/galaxy/galaxy-dist) and it runs OK. I recommend you updating your Galaxy instance towards tip of the galaxy-dist.
Martin
On Thu, Sep 26, 2013 at 3:54 PM, Jan Hapala jan@hapala.cz wrote:
I could not find a "Galaxy version" in the application but speaking about hg, it is Aug 19 (10411:c42567f43aa7). Jan
2013/9/26 Martin Čech marten@bx.psu.edu
Jan,
It works for me with the newest galaxy-central version. I registered new user without a problem having the pbkdf2 turned off.
What version are you using now?
Martin
On Thu, Sep 26, 2013 at 4:02 AM, Jan Hapala jan@hapala.cz wrote:
Ahoj Martine,
thanks for your response. That was a pretty stupid mistake, hard to notice even though I program in Python. However, this has not solved my problem, I get the same error. (I have also made sure that it is in the right section.)
Jan
2013/9/25 Martin Čech emulatorer@gmail.com
Ahoj Honzo,
Python is case-sensitive. Use 'use_pbkdf2 = False' and make sure you put it under the '[app:main]' section in the config file.
Enjoy Galaxy!
best
Martin Cech
On Wed, Sep 25, 2013 at 9:15 AM, Jan Hapala jan@hapala.cz wrote:
Hi,
I need to run Galaxy with ProFTPd, therefore I need to disable the PBKDF2 encryption of the passwords (as stated here http://dev.list.galaxyproject.org/disable-PBKDF2-revert-to-SHA1-td4661274.ht... ).
However, when I do add this line: use_pbkdf2 = false to the universe_wsgi.ini, restart Galaxy, submit the form for the password change (or register as a new user) I get an error "_hashlib.HASH object has no attribute __getitem__".
I got the same result with a version as of Jul 2 and the most recent tag (10411:c42567f43aa7, Aug 19).
I would be much grateful for your suggestions!
Regards, Jan
URL: http://127.0.0.1:8080/user/edit_info?cntrller=user&user_id=f2db41e1fa331... File '.../eggs/WebError-0.8a-py2.7.egg/weberror/evalexception/middleware.py', line 364 in respond app_iter = self.application(environ, detect_start_response) File '.../eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response) File '.../eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response) File '.../lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response ) File '.../lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs ) File '.../lib/galaxy/webapps/galaxy/controllers/user.py', line 842 in edit_info trans.sa_session.flush() File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/scoping.py', line 114 in do File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/session.py', line 1718 in flush File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/session.py', line 1789 in _flush File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/unitofwork.py', line 331 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/unitofwork.py', line 475 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/persistence.py', line 59 in save_obj File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/orm/persistence.py', line 485 in _emit_update_statements File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1449 in execute File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1584 in _execute_clauseelement File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1651 in _execute_context File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/base.py', line 1647 in _execute_context File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/engine/default.py', line 475 in _init_compiled File '.../eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/types.py', line 626 in process File '.../lib/galaxy/model/custom_types.py', line 125 in process_bind_param value = value[0:self.impl.length] StatementError: '_hashlib.HASH' object has no attribute '__getitem__' (original cause: TypeError: '_hashlib.HASH' object has no attribute '__getitem__') 'UPDATE galaxy_user SET update_time=%(update_time)s, password=%(password)s WHERE galaxy_user.id = %(galaxy_user_id)s' [{u'galaxy_user_id': 1, 'password': <sha1 HASH object @ 0x7338bc0>}]
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
galaxy-dev@lists.galaxyproject.org
-
Jan Hapala -
Martin Čech