Hello, The mm9 bt2 indexes were restored this morning. You can track this and other current data fixes through this Trello card: https://trello.com/c/SbizUDQt Thanks for your patience during the migration. We are moving on to data now, both corrections and updates. Jen Galaxy team On 11/7/13 3:58 PM, IIHG Galaxy Administrator wrote:

Sending to galaxy-dev instead.

From: Srinivas Maddhi <iihg-galaxy-admin@uiowa.edu <mailto:iihg-galaxy-admin@uiowa.edu>> Date: Friday, November 1, 2013 11:56 AM To: "galaxy-user@lists.bx.psu.edu <mailto:galaxy-user@lists.bx.psu.edu>" <galaxy-user@lists.bx.psu.edu <mailto:galaxy-user@lists.bx.psu.edu>> Subject: Empty bowtie2 output

In follow-up to http://user.list.galaxyproject.org/Empty-bowtie2-output-tp4656137.html, is there: - an ETA on when the issue with Bowtie2, in August 2013 distribution, generating empty output will be fixed (if not already fixed) ? - a suggested workaround (revert to an older version of that particular tool etc.) in the meantime ?

Thank you.

Unrelated: wasn't able to determine how to update that thread to request status, hence creating a new one.

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