Hi Sabrina

yes, you can add any genome to "builds.txt" (as an example, we have several plasmids added as genomes in our Galaxy server). Just make sure the dbkey (e.g. hg19) you gonna add is unique.

If you also intend to use the built in visualization tools, make sure to add the corresponding files to "/tool-data/shared/ucsc/chrom/"

And don't forget to restart the server, to put the changes into effect

Hans-Rudolf

On 05/12/2015 05:29 PM, Sabrina rodriguez wrote:

Dear all,

I am working on integrating some bioinformatics tools into galaxy for a research team in France. I have a question with regard to the "/tool-data/shared/ucsc/builds.txt" file. I would like to add a new reference genome that is not coming from UCSC. Could you please tell me if this is feasible and, in that case, how to process?

Thank you very much in advance.

Best regards,

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