Hi ! I'am trying to set IGV as a display application in Galaxy. So I have addedin datatypes_conf.xml, under the bam datatype the display application for igv/bam (<display file="igv/bam.xml" />). However the Links dose not appear in bam history items. I see only " display in IGB Localhttp://genecloud.abgenomica.com/genecloud/display_application/07174ce6fe826466/igb_bam/Local Webhttp://genecloud.abgenomica.com/genecloud/display_application/07174ce6fe826466/igb_bam/Web" Could someone help me . Thanks Amine
Resolved! In fact i forgot to set the database infomration (hg18) in the bam item. so Now I can see the display igv link :)
2012/7/3 Chebbi Mohamed Amine chebbimamine@gmail.com
Hi ! I'am trying to set IGV as a display application in Galaxy. So I have addedin datatypes_conf.xml, under the bam datatype the display application for igv/bam (<display file="igv/bam.xml" />). However the Links dose not appear in bam history items. I see only " display in IGB Localhttp://genecloud.abgenomica.com/genecloud/display_application/07174ce6fe826466/igb_bam/Local Webhttp://genecloud.abgenomica.com/genecloud/display_application/07174ce6fe826466/igb_bam/Web" Could someone help me . Thanks Amine
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