Hello, Just want to clarify two questions: 1) Is there a way to get the absolute path of a dataset directly from the interface? This is sometimes useful to create a local directory of all required files (by using symlink) if we know the full path. 2) How do we create a data library from datasets from multiple saved histories? I could see "upload dataset from current history" option in "Add dataset" of DataLibrary, but what is the case if files to be uploaded are distributed in many histories? Do we can another way to accomplish this? Best, Raj ________________________________ This e-mail contains PRIVILEGED AND CONFIDENTIAL INFORMATION intended solely for the use of the addressee(s). If you are not the intended recipient, please notify the sender by e-mail and delete the original message. Further, you are not to copy, disclose, or distribute this e-mail or its contents to any other person and any such actions that are unlawful. This e-mail may contain viruses. Ocimum Biosolutions has taken every reasonable precaution to minimize this risk, but is not liable for any damage you may sustain as a result of any virus in this e-mail. You should carry out your own virus checks before opening the e-mail or attachment. The information contained in this email and any attachments is confidential and may be subject to copyright or other intellectual property protection. If you are not the intended recipient, you are not authorized to use or disclose this information, and we request that you notify us by reply mail or telephone and delete the original message from your mail system. OCIMUMBIO SOLUTIONS (P) LTD
On Apr 9, 2012, at 3:04 AM, Praveen Raj Somarajan wrote:
Hello,
Just want to clarify two questions:
1) Is there a way to get the absolute path of a dataset directly from the interface? This is sometimes useful to create a local directory of all required files (by using symlink) if we know the full path.
Hi Raj, I'm not clear on whether you mean programmatically or not. If not, you can see the paths to library datasets from their info page if you're an admin. For history datasets, it's not possible to do from the interface, and you have to use the script galaxy-dist/scripts/helper.py.
2) How do we create a data library from datasets from multiple saved histories? I could see "upload dataset from current history" option in "Add dataset" of DataLibrary, but what is the case if files to be uploaded are distributed in many histories? Do we can another way to accomplish this?
There's not a way to do this, unfortunately, without switching to the history that you wish to import from. --nate
Best,
Raj
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participants (2)
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Nate Coraor -
Praveen Raj Somarajan