Hi Greg,
I found an issue in Toolshed, not sure if it has been reported before.
Steps:
1- Make a repository and add a tool .xml and a README file
2- Reset metadata and check if all information appears in the toolshed UI
3- Now delete the README file from the hg repository
4- Commit
5- (not sure whether I did this step) reset metadata
6- Now add the README file back but with different contents. Commit, reset metadata
7- In the toolshed UI you will see that the OLD REAME contents are displayed.
This is just one example...I have the feeling it is not restricted to the README files of course...so it can be quite a serious issue.
Regards,
Pieter Lukasse Wageningen UR, Plant Research International Departments of Bioscience and Bioinformatics Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands +31-317481122; skype: pieter.lukasse.wur http://www.pri.wur.nlhttp://www.pri.wur.nl/
Hello Pieter,
I've added the following Trello card for this issue - we'll take a looke as soon as possible.
https://trello.com/c/LZ3Lj9ye/125-problem-with-adding-deleting-adding-readme...
Thanks for reporing this,
Greg Von Kuster
On Dec 30, 2013, at 8:09 AM, "Lukasse, Pieter" pieter.lukasse@wur.nl wrote:
Hi Greg,
I found an issue in Toolshed, not sure if it has been reported before.
Steps:
1- Make a repository and add a tool .xml and a README file 2- Reset metadata and check if all information appears in the toolshed UI 3- Now delete the README file from the hg repository 4- Commit 5- (not sure whether I did this step) reset metadata 6- Now add the README file back but with different contents. Commit, reset metadata 7- In the toolshed UI you will see that the OLD REAME contents are displayed.
This is just one example...I have the feeling it is not restricted to the README files of course...so it can be quite a serious issue.
Regards,
Pieter Lukasse
Wageningen UR, Plant Research International
Departments of Bioscience and Bioinformatics
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands
+31-317481122; skype: pieter.lukasse.wur
Hi Greg,
Thanks for this. I have been observing the behaviour more closely and actually it looks like there could be a related issue: sometimes after resetting the metadata if reported as "successfully finished" it still takes some time (~3 minutes?) before all changes are also really visible in the UI (e.g. when clicking on one of the repositories again in the list "repositories I own").
Regards,
Pieter.
From: Greg Von Kuster [mailto:greg@bx.psu.edu] Sent: maandag 30 december 2013 16:39 To: Lukasse, Pieter Cc: galaxy-dev@bx.psu.edu Subject: Re: repository metadata reset not always working
Hello Pieter,
I've added the following Trello card for this issue - we'll take a looke as soon as possible.
https://trello.com/c/LZ3Lj9ye/125-problem-with-adding-deleting-adding-readme...
Thanks for reporing this,
Greg Von Kuster
On Dec 30, 2013, at 8:09 AM, "Lukasse, Pieter" <pieter.lukasse@wur.nlmailto:pieter.lukasse@wur.nl> wrote:
Hi Greg,
I found an issue in Toolshed, not sure if it has been reported before.
Steps:
1- Make a repository and add a tool .xml and a README file 2- Reset metadata and check if all information appears in the toolshed UI 3- Now delete the README file from the hg repository 4- Commit 5- (not sure whether I did this step) reset metadata 6- Now add the README file back but with different contents. Commit, reset metadata 7- In the toolshed UI you will see that the OLD REAME contents are displayed.
This is just one example...I have the feeling it is not restricted to the README files of course...so it can be quite a serious issue.
Regards,
Pieter Lukasse Wageningen UR, Plant Research International Departments of Bioscience and Bioinformatics Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands +31-317481122; skype: pieter.lukasse.wur http://www.pri.wur.nlhttp://www.pri.wur.nl/
Pieter,
I believe this may have been fixed in 11980:725010d022f3, which is also running on the test tool shed. If you're tracking -central locally, could you try updating to that revision or later, and see if the problem recurs?
--Dave B.
On 12/31/2013 06:55 AM, Lukasse, Pieter wrote:
Hi Greg,
Thanks for this. I have been observing the behaviour more closely and actually it looks like there could be a related issue: sometimes after resetting the metadata if reported as “successfully finished” it still takes some time (~3 minutes?) before all changes are also really visible in the UI (e.g. when clicking on one of the repositories again in the list “repositories I own”).
Regards,
Pieter.
*From:*Greg Von Kuster [mailto:greg@bx.psu.edu] *Sent:* maandag 30 december 2013 16:39 *To:* Lukasse, Pieter *Cc:* galaxy-dev@bx.psu.edu *Subject:* Re: repository metadata reset not always working
Hello Pieter,
I've added the following Trello card for this issue - we'll take a looke as soon as possible.
https://trello.com/c/LZ3Lj9ye/125-problem-with-adding-deleting-adding-readme...
Thanks for reporing this,
Greg Von Kuster
On Dec 30, 2013, at 8:09 AM, "Lukasse, Pieter" <pieter.lukasse@wur.nl mailto:pieter.lukasse@wur.nl> wrote:
Hi Greg,
I found an issue in Toolshed, not sure if it has been reported before.
Steps:
1-Make a repository and add a tool .xml and a README file
2-Reset metadata and check if all information appears in the toolshed UI
3-Now delete the README file from the hg repository
4-Commit
5-(not sure whether I did this step) reset metadata
6-Now add the README file back but with different contents. Commit, reset metadata
7-In the toolshed UI you will see that the*OLD*REAME contents are displayed.
This is just one example...I have the feeling it is not restricted to the README files of course...so it can be quite a serious issue.
Regards,
Pieter Lukasse
Wageningen UR, Plant Research International
Departments of Bioscience and Bioinformatics
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands
+31-317481122; skype: pieter.lukasse.wur
http://www.pri.wur.nl http://www.pri.wur.nl/
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