Hi Vasu, Galaxy automatically sorts bam files, with samtools, on upload if they aren't already sorted. Are you seeing instances where it's not the case? Thanks, Kanwei On Fri, Feb 18, 2011 at 10:01 PM, vasu punj <punjv@yahoo.com> wrote:

Can I sort (chr) bam file in Glaxay or I have to go back to samtools please?

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